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Biotechnology Information gene expression omnibus geo database
Gene Expression Omnibus Geo Database, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/gene+expression+omnibus/expression+gene+omnibus+%E2%80%A2/pmc13273163-91-9-26
Average 86 stars, based on 1 article reviews
gene expression omnibus geo database - by Bioz Stars, 2026-10
86/100 stars

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RNA Sequencing:

Article Title: Convergent molecular signatures across eating disorders and obsessive-compulsive disorder in the human brain.
Article Snippet: .. • All original RNA sequencing data are publicly through the National Center for Biotechnology Information Gene Expression Omnibus https:// www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE262138 (GEO: GSE262138). ..

Article Title: M YCN Amplification Drives Ferroptosis Susceptibility via Cysteine Metabolism in Retinoblastoma
Article Snippet: .. RNA sequencing data have been deposited in the National Center for Biotechnology Information Gene Expression Omnibus (accession no. GSE315912). ..

Gene Expression:

Article Title: Convergent molecular signatures across eating disorders and obsessive-compulsive disorder in the human brain.
Article Snippet: .. • All original RNA sequencing data are publicly through the National Center for Biotechnology Information Gene Expression Omnibus https:// www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE262138 (GEO: GSE262138). ..

Article Title: Feedback loops between DNMT1 and autophagy as well as senescence promotes organ aging and canities.
Article Snippet: Alternations of DNA methylation occur in aging, which is regulated by DNA methyltransferases (DNMTs).. In this study, we show that even though the transcription of DNMT1, the only enzyme that maintains DNA methylation in the mammalian genome, is reported to be decreased in an age-dependent manner, the decrease of Dnmt1 mRNA does not result in a decrease of its protein.. Instead, DNMT1 protein is increased in aged mouse tissues, which is responsible for the methylation of genes related to macroautophagy/autophagy, senescence repression, and melanin synthesis and transport in aged organs, resulting in a decline of autophagy, an increase of senescence in those organs, and a decrease in melanin production in hair follicles (canities) in response to ionizing radiation (IR).

Article Title: Wnt-dependent ontogeny of acellular cementum-forming cementoblasts on the tooth root surface.
Article Snippet: .. The scRNA-seq dataset presented herein has been deposited in the National Center for Biotechnology Information (NCBI)'s Gene Expression Omnibus (GEO). ..

Article Title: Epidermal PPARγ Signaling as a Suppressor of Toll-like Receptor-Mediated Inflammation and Fibrosis: Relevance to Cutaneous Squamous Cell Carcinoma
Article Snippet: .. The raw data supporting the conclusions of this article were deposited with the National Center for Biotechnology Information Gene Expression Omnibus (GEO). ..

Article Title: Epidermal PPARγ Signaling as a Suppressor of Toll-like Receptor-Mediated Inflammation and Fibrosis: Relevance to Cutaneous Squamous Cell Carcinoma.
Article Snippet: .. Data Availability Statement: The raw data supporting the conclusions of this article were deposited with the National Center for Biotechnology Information Gene Expression Omnibus (GEO). ..

Article Title: Identification and initial experimental assessment of DCLK3 as a potential sarcopenia biomarker: A multi-omics and machine learning approach.
Article Snippet: .. The Gene Expression Omnibus (GEO; https://www.ncbi.nlm.nih. gov/geo/), a public repository established by the National Center for Biotechnology Information (NCBI), served as the primary data source for this study (Barrett et al., 2013; Zhong et al., 2024; Li et al., 2025). .. We retrieved three bulk RNA-seq datasets (GSE111006, GSE111010, and GSE111016) generated on the GPL16791 Illumina HiSeq 2500 platform (Homo sapiens).

Article Title: M YCN Amplification Drives Ferroptosis Susceptibility via Cysteine Metabolism in Retinoblastoma
Article Snippet: .. RNA sequencing data have been deposited in the National Center for Biotechnology Information Gene Expression Omnibus (accession no. GSE315912). ..

Article Title: A Phase Ib Trial of Copanlisib in Combination with Venetoclax in Patients with Relapsed or Refractory B-Cell Non-Hodgkin Lymphoma-SAKK 66/18 Trial.
Article Snippet: .. Expression data will be available in the National Center for Biotechnology Information Gene Expression Omnibus (http://www.ncbi.nlm.nih.gov/geo). ..

Sequencing:

Article Title: Feedback loops between DNMT1 and autophagy as well as senescence promotes organ aging and canities.
Article Snippet: Alternations of DNA methylation occur in aging, which is regulated by DNA methyltransferases (DNMTs).. In this study, we show that even though the transcription of DNMT1, the only enzyme that maintains DNA methylation in the mammalian genome, is reported to be decreased in an age-dependent manner, the decrease of Dnmt1 mRNA does not result in a decrease of its protein.. Instead, DNMT1 protein is increased in aged mouse tissues, which is responsible for the methylation of genes related to macroautophagy/autophagy, senescence repression, and melanin synthesis and transport in aged organs, resulting in a decline of autophagy, an increase of senescence in those organs, and a decrease in melanin production in hair follicles (canities) in response to ionizing radiation (IR).

Expressing:

Article Title: A Phase Ib Trial of Copanlisib in Combination with Venetoclax in Patients with Relapsed or Refractory B-Cell Non-Hodgkin Lymphoma-SAKK 66/18 Trial.
Article Snippet: .. Expression data will be available in the National Center for Biotechnology Information Gene Expression Omnibus (http://www.ncbi.nlm.nih.gov/geo). ..



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